PTM Viewer

AT1G63020.1

Arabidopsis thaliana [ath]

nuclear RNA polymerase D1A

No PTMs currently found

Gene Family: HOM05D000228

Other Names: NRPD1,POL IVA,NUCLEAR RNA POLYMERASE D 1A,SDE4,SMD2,SILENCING MOVEMENT DEFICIENT 2; NRPD1A

Uniprot

Link out to other resources with this protein ID : TAIR | PeptideAtlas | ARAPORT | PhosPhAt

PTMs

There are no stored PTMs for this protein

Sequence

Length: 1453

MEDDCEELQVPVGTLTSIGFSISNNNDRDKMSVLEVEAPNQVTDSRLGLPNPDSVCRTCGSKDRKVCEGHFGVINFAYSIINPYFLKEVAALLNKICPGCKYIRKKQFQITEDQPERCRYCTLNTGYPLMKFRVTTKEVFRRSGIVVEVNEESLMKLKKRGVLTLPPDYWSFLPQDSNIDESCLKPTRRIITHAQVYALLLGIDQRLIKKDIPMFNSLGLTSFPVTPNGYRVTEIVHQFNGARLIFDERTRIYKKLVGFEGNTLELSSRVMECMQYSRLFSETVSSSKDSANPYQKKSDTPKLCGLRFMKDVLLGKRSDHTFRTVVVGDPSLKLNEIGIPESIAKRLQVSEHLNQCNKERLVTSFVPTLLDNKEMHVRRGDRLVAIQVNDLQTGDKIFRSLMDGDTVLMNRPPSIHQHSLIAMTVRILPTTSVVSLNPICCLPFRGDFDGDCLHGYVPQSIQAKVELDELVALDKQLINRQNGRNLLSLGQDSLTAAYLVNVEKNCYLNRAQMQQLQMYCPFQLPPPAIIKASPSSTEPQWTGMQLFGMLFPPGFDYTYPLNNVVVSNGELLSFSEGSAWLRDGEGNFIERLLKHDKGKVLDIIYSAQEMLSQWLLMRGLSVSLADLYLSSDLQSRKNLTEEISYGLREAEQVCNKQQLMVESWRDFLAVNGEDKEEDSVSDLARFCYERQKSATLSELAVSAFKDAYRDVQALAYRYGDQSNSFLIMSKAGSKGNIGKLVQHSMCIGLQNSAVSLSFGFPRELTCAAWNDPNSPLRGAKGKDSTTTESYVPYGVIENSFLTGLNPLESFVHSVTSRDSSFSGNADLPGTLSRRLMFFMRDIYAAYDGTVRNSFGNQLVQFTYETDGPVEDITGEALGSLSACALSEAAYSALDQPISLLETSPLLNLKNVLECGSKKGQREQTMSLYLSEYLSKKKHGFEYGSLEIKNHLEKLSFSEIVSTSMIIFSPSSNTKVPLSPWVCHFHISEKVLKRKQLSAESVVSSLNEQYKSRNRELKLDIVDLDIQNTNHCSSDDQAMKDDNVCITVTVVEASKHSVLELDAIRLVLIPFLLDSPVKGDQGIKKVNILWTDRPKAPKRNGNHLAGELYLKVTMYGDRGKRNCWTALLETCLPIMDMIDWGRSHPDNIRQCCSVYGIDAGRSIFVANLESAVSDTGKEILREHLLLVADSLSVTGEFVALNAKGWSKQRQVESTPAPFTQACFSSPSQCFLKAAKEGVRDDLQGSIDALAWGKVPGFGTGDQFEIIISPKVHGFTTPVDVYDLLSSTKTMRRTNSAPKSDKATVQPFGLLHSAFLKDIKVLDGKGIPMSLLRTIFTWKNIELLSQSLKRILHSYEINELLNERDEGLVKMVLQLHPNSVEKIGPGVKGIRVAKSKHGDSCCFEVVRIDGTFEDFSYHKCVLGATKIIAPKKMNFYKSKYLKNGTLESGGFSENP

Domains & Sites

Clear highlighted range

**Interpro Domains**
IPR ID	Description	From	To
IPR000722	RNA polymerase, alpha subunit	315	471
IPR006592	RNA polymerase, N-terminal	216	501
IPR007066	RNA polymerase Rpb1, domain 3	476	627
IPR007083	RNA polymerase Rpb1, domain 4	697	754

**Sites**
Type	Description	Position
Active Site	1	56
Active Site	1	59
Active Site	1	67
Active Site	1	70
Active Site	2	97
Active Site	2	100
Active Site	2	121
Active Site	catalytic	447
Active Site	catalytic	449
Active Site	catalytic	451

AT1G63020.1

Arabidopsis thaliana [ath]

nuclear RNA polymerase D1A

No PTMs currently found

PLAZA: AT1G63020

Gene Family: HOM05D000228

Other Names: NRPD1,POL IVA,NUCLEAR RNA POLYMERASE D 1A,SDE4,SMD2,SILENCING MOVEMENT DEFICIENT 2; NRPD1A

Uniprot

Q9LQ02

Link out to other resources with this protein ID : TAIR | PeptideAtlas | ARAPORT | PhosPhAt

PTMs

Sequence

Length: 1453

Domains & Sites

BLAST

Perform a BLAST search for this sequence, or a part of this sequence (minimum 50 characters)
A downloadable tutorial can be found here

AT1G63020.1

Arabidopsis thaliana [ath]

nuclear RNA polymerase D1A

No PTMs currently found

PLAZA: AT1G63020

Gene Family: HOM05D000228

Other Names: NRPD1,POL IVA,NUCLEAR RNA POLYMERASE D 1A,SDE4,SMD2,SILENCING MOVEMENT DEFICIENT 2; NRPD1A

Uniprot

Q9LQ02

Link out to other resources with this protein ID : TAIR | PeptideAtlas | ARAPORT | PhosPhAt

PTMs

Sequence

Length: 1453

Domains & Sites

BLAST

Perform a BLAST search for this sequence, or a part of this sequence (minimum 50 characters)A downloadable tutorial can be found here

Perform a BLAST search for this sequence, or a part of this sequence (minimum 50 characters)
A downloadable tutorial can be found here